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Volume 51 Issue 2
Feb.  2024
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Article Contents

GeMemiOM: the curated database on genes, putative methylation study targets, and microRNA targets for otitis media

doi: 10.1016/j.jgg.2023.07.010
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K. Abhishek acknowledges Department of Science and Technology (DST), Govt. of India for DST-INSPIRE fellowship and Regional Center of Biotechnology, Faridabad for Ph.D. registration. K. Abhishek also acknowledges Mr. Ranjan Kumar Barik for assisting during data curation. B. K. Mohanta and P. Kumari are thankful to Council for Scientific and Industrial Research (CSIR) and University Grant Commission (UGC) for fellowship. The Institute of Life Sciences (ILS) high performance computing facility is duly acknowledged for providing computational facility.

  • Received Date: 2023-03-29
  • Accepted Date: 2023-07-24
  • Rev Recd Date: 2023-07-21
  • Publish Date: 2023-08-02
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  • Deaton, A.M., Bird, A., 2011. CpG islands and the regulation of transcription. Genes Dev. 25, 1010-1022.
    Duan, L., Hu, J., Xiong, X., Liu, Y., Wang, J., 2018. The role of DNA methylation in coronary artery disease. Gene 646, 91-97.
    Giese, A.P., Ali, S., Isaiah, A., Aziz, I., Riazuddin, S., Ahmed, Z.M., 2020. Genomics of otitis media (OM): molecular genetics approaches to characterize disease pathophysiology. Front. Genet. 11, 313.
    Handy, D.E., Castro, R., Loscalzo, J., 2011. Epigenetic modifications: basic mechanisms and role in cardiovascular disease. Circulation 123, 2145-2156.
    Kurdyukov, S., Bullock, M., 2016. DNA methylation analysis: Choosing the right method. Biology (Basel) 5, 3.
    Lancet, T., 2016. Hearing loss: an important global health concern. Lancet 387, 30777-30772.
    Ling, C., Groop, L., 2009. Epigenetics: a molecular link between environmental factors and type 2 diabetes. Diabetes 58, 2718-2725.
    Luo, Y., He, P., Wen, X., Gong, R., Hu, X., Zheng, X., 2022. Otitis Media and Its Association With Hearing Loss in Chinese Adults: A Population Based Study of 4 Provinces in China. Front. Public Health, 10, 852556.
    Mattick, J.S., Amaral, P.P., Carninci, P., Carpenter, S., Chang, H.Y., Chen, L.-L., Chen, R., Dean, C., Dinger, M.E., Fitzgerald, K.A., et al., 2023. Long non-coding RNAs: definitions, functions, challenges and recommendations. Nat. Rev. Mol. Cell Biol. 24, 430-447.
    Monasta, L., Ronfani, L., Marchetti, F., Montico, M., Brumatti, L.V., Bavcar, A., Grasso, D., Barbiero, C., Tamburlini, G., 2012. Burden of disease caused by otitis media: systematic review and global estimates. PloS ONE 7, e36226.
    Penido, N.d.O., Chandrasekhar, S.S., Borin, A., Maranhao, A.S.d.A., Testa, J.R.G., 2016. Complicacoes das otites media-um problema potencialmente letal ainda presente. Braz. J. Otorhinolaryngol. 82, 253-262.
    Rovers, M., Haggard, M., Gannon, M., Koeppen-Schomerus, G., Plomin, R., 2002. Heritability of symptom domains in otitis media: a longitudinal study of 1,373 twin pairs. Am. J. Epidemiol. 155, 958-964.
    Sant, K.E., Goodrich, J.M., 2019. Chapter 5-2 - Methods for Analysis of DNA Methylation, in: McCullough, S.D., Dolinoy, D.C. (Eds.), Toxicoepigenetics. Academic Press, pp. 347-377.
    Shastry, B.S., 2007. SNPs in disease gene mapping, medicinal drug development and evolution. J. Hum. Genet. 52, 871-880.
    Shyamala, N., Kongettira, C.L., Puranam, K., Kupsal, K., Kummari, R., Padala, C., Hanumanth, S.R., 2022. In silico identification of single nucleotide variations at CpG sites regulating CpG island existence and size. Sci. Rep. 12, 1-17.
    Sleutels, F., Barlow, D.P., 2002. The origins of genomic imprinting in mammals. Adv. Genet. 46, 119-164.
    Statello, L., Guo, C.-J., Chen, L.-L., Huarte, M., 2021. Gene regulation by long non-coding RNAs and its biological functions. Nat. Rev. Mol. Cell Biol 22, 96-118.
    Vohra, M., Sharma, A.R., Rai, P.S., 2020. SNPs in sites for DNA methylation, transcription factor binding, and miRNA targets leading to allele-specific gene expression and contributing to complex disease risk: A systematic review. Public Health Genom. 23, 155-170.
    Zoghbi, H.Y., Beaudet, A.L., 2016. Epigenetics and human disease. Cold Spring Harb. perspect. biol. 8, a019497.
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