Nocturnal to Diurnal Transition in the Common Ancestor of Haplorrhines: Evidence from Genomic-Scan for Positively Selected Genes

Xue Cao^{a, b, c},
Yan-Bo Sun^a,
David M. Irwin^{a, d},
Guo-Dong Wang^{a
, ,},
Ya-Ping Zhang^{a, e
, ,}

a.
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Kunming 650223, China
b.
University of Chinese Academy of Sciences, Beijing 100049, China
c.
Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming 650000, China
d.
Department of Laboratory Medicine and Pathobiology, University of Toronto, 1 King's College Circle, Toronto, Ontario M5S 1A8, Canada
e.
Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China

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Corresponding author: E-mail address: wanggd@mail.kiz.ac.cn (Guo-Dong Wang); E-mail address: zhangyp@mail.kiz.ac.cn (Ya-Ping Zhang)

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[1]	Arnold, C., Matthews, L.J., Nunn, C.L. The 10kTrees website: a new online resource for primate phylogeny Evol. Anthropol., 19 (2010),pp. 114-118
[2]	Bellet, M.M., Deriu, E., Liu, J.Z. et al. Circadian clock regulates the host response to Salmonella Proc. Natl. Acad. Sci. USA, 110 (2013),pp. 9897-9902
[3]	Griffin, R.H., Matthews, L.J., Nunn, C.L. Evolutionary disequilibrium and activity period in primates: a bayesian phylogenetic approach Am. J. Phys. Anthropol., 147 (2012),pp. 409-416
[4]	Heesy, C.P., Ross, C.F. Evolution of activity patterns and chromatic vision in primates: morphometrics, genetics and cladistics J. Hum. Evol., 40 (2001),pp. 111-149
[5]	Huang da, W., Sherman, B.T., Lempicki, R.A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources Nat. Protoc., 4 (2009),pp. 44-57
[6]	Kanehisa, M., Goto, S. KEGG: kyoto encyclopedia of genes and genomes Nucleic Acids Res., 28 (2000),pp. 27-30
[7]	Kohl, S., Baumann, B., Rosenberg, T. et al. Am. J. Hum. Genet., 71 (2002),pp. 422-425
[8]	Kosiol, C., Vinar, T., da Fonseca, R.R. et al. Patterns of positive selection in six mammalian genomes PLoS Genet., 4 (2008),p. e1000144
[9]	Ross, C.F. Into the light: the origin of Anthropoidea Ann. Rev. Anthropol., 29 (2000),pp. 147-194
[10]	Shen, Y.Y., Liang, L., Zhu, Z.H. et al. Adaptive evolution of energy metabolism genes and the origin of flight in bats Proc. Natl. Acad. Sci. USA, 107 (2010),pp. 8666-8671
[11]	Shultz, S., Opie, C., Atkinson, Q.D. Stepwise evolution of stable sociality in primates Nature, 479 (2011),pp. 219-222
[12]	Sun, Y.B., Zhou, W.P., Liu, H.Q. et al. Genome-wide scans for candidate genes involved in the aquatic adaptation of dolphins Genome Biol. Evol., 5 (2013),pp. 130-139
[13]	Szklarczyk, D., Franceschini, A., Kuhn, M. et al. The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored Nucleic Acids Res., 39 (2011),pp. D561-D568
[14]	Tan, Y., Yoder, A.D., Yamashita, N. et al. Evidence from opsin genes rejects nocturnality in ancestral primates Proc. Natl. Acad. Sci. USA, 102 (2005),pp. 14712-14716
[15]	Trudeau, M.C., Zagotta, W.N. An intersubunit interaction regulates trafficking of rod cyclic nucleotide-gated channels and is disrupted in an inherited form of blindness Neuron, 34 (2002),pp. 197-207
[16]	Wu, C., Orozco, C., Boyer, J. et al. BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources Genome Biol., 10 (2009),p. R130
[17]	Yang, Z.H. PAML 4: phylogenetic analysis by maximum likelihood Mol. Biol. Evol., 24 (2007),pp. 1586-1591

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doi: 10.1016/j.jgg.2014.11.004

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Nocturnal to Diurnal Transition in the Common Ancestor of Haplorrhines: Evidence from Genomic-Scan for Positively Selected Genes

Corresponding author: E-mail address: wanggd@mail.kiz.ac.cn (Guo-Dong Wang); E-mail address: zhangyp@mail.kiz.ac.cn (Ya-Ping Zhang)

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doi: 10.1016/j.jgg.2014.11.004

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Nocturnal to Diurnal Transition in the Common Ancestor of Haplorrhines: Evidence from Genomic-Scan for Positively Selected Genes

Corresponding author: E-mail address: wanggd@mail.kiz.ac.cn (Guo-Dong Wang); E-mail address: zhangyp@mail.kiz.ac.cn (Ya-Ping Zhang)

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