Molecular evolution of pancreatic ribonuclease gene (RNase1) in Rodentia

Da-Tian Lang¹,
Xiao-Ping Wang^{2, 3},
Lei Wang⁴,
Li Yu^{5, 6
, ,}

1.
Chemistry and Life Science Department, Zhaotong University, Zhaotong 657000, China
2.
State Key Laboratory for Conservation and Utilization of Bio-resource in Yunnan, Yunnan University, Kunming 650091, China
3.
Key Laboratory for Animal Genetic Diversity and Evolution of High Education in Yunnan Province, Yunnan University, Kunming 650091, China
4.
Chemistry and Life Science Department, Zhaotong University, Zhaotong 657000, China
5.
State Key Laboratory for Conservation and Utilization of Bio-resource in Yunnan, Yunnan University, Kunming 650091, China
6.
Key Laboratory for Animal Genetic Diversity and Evolution of High Education in Yunnan Province, Yunnan University, Kunming 650091, China

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Corresponding author: E-mail address: yuli@ynu.edu.cn (Li Yu)

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参考文献(22)

[1]	Barnard, E.A. Biological function of pancreatic ribonuclease Nature, 221 (1969),pp. 340-344
[2]	Breukelman, H.J., Jekel, P.A., Dubois, J.Y. et al. Eur. J. Biochem., 268 (2001),pp. 3890-3897
[3]	Breukelman, H.J., Munnik van der, N., Kleineidam, R.G. et al. Secretory ribonuclease genes and pseudogenes in true ruminants Gene, 212 (1998),pp. 259-268
[4]	Churakov, G., Sadasivuni, M.K., Rosenbloom, K.R. et al. Rodent evolution: back to the root Mol. Biol. Evol., 27 (2010),pp. 1315-1326
[5]	Confalone, E., Beintema, J.J., Sasso, M.P. et al. Molecular evolution of genes encoding ribonucleases in ruminant species J. Mol. Evol., 41 (1995),pp. 850-858
[6]	Dubois, J.-Y.F., Ursing, B.M., Kolkman, J.A. et al. Molecular evolution of mammalian ribonucleases 1 Mol. Phylogenet. Evol., 27 (2003),pp. 453-463
[7]	Dubois, J.Y., Jekel, P.A., Mulder, P.P. et al. Pancreatic-type ribonuclease 1 gene duplications in rat species J. Mol. Evol., 55 (2002),pp. 522-533
[8]	Fang, X., Nevo, E., Han, L. et al. Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax. Nat. Commun., 5 (2014),p. 3966
[9]	Gnerre, S., Maccallum, I., Przybylski, D. et al. High-quality draft assemblies of mammalian genomes from massively parallel sequence data Proc. Natl. Acad. Sci. U. S. A., 108 (2011),pp. 1513-1518
[10]	Goo, S.M., Cho, S. The expansion and functional diversification of the mammalian ribonuclease a superfamily epitomizes the efficiency of multigene families at generating biological novelty Genome. Biol. Evol., 5 (2013),pp. 2124-2140
[11]	Liu, J., Wang, X.P., Cho, S. et al. Evolutionary and functional novelty of pancreatic ribonuclease: a study of Musteloidea (order Carnivora) Sci. Rep., 4 (2014),p. 5070
[12]	Romanenko, S.A., Perelman, P.L., Trifonov, V.A. et al. Chromosomal evolution in Rodentia Heredity, 108 (2012),pp. 4-16
[13]	Siegel, S.J., Percopo, C.M., Dyer, K.D. et al. Mamm. Genome, 20 (2009),pp. 749-757
[14]	Voloch, C.M., Vilela, J.F., Loss-Oliveira, L. et al. Phylogeny and chronology of the major lineages of New World hystricognath rodents: insights on the biogeography of the Eocene/Oligocene arrival of mammals in South America BMC. Res. Notes, 6 (2013),p. 160
[15]	Xu, H., Liu, Y., Meng, F. et al. Multiple bursts of pancreatic ribonuclease gene duplication in insect-eating bats Gene, 526 (2013),pp. 112-117
[16]	Xu, L., Su, Z., Gu, Z. et al. Evolution of RNases in leaf monkeys: being parallel gene duplications or parallel gene conversions is a problem of molecular phylogeny Mol. Phylogenet. Evol., 50 (2009),pp. 397-400
[17]	Yu, L., Wang, X.Y., Jin, W. et al. Mol. Biol. Evol., 27 (2010),pp. 121-131
[18]	Yu, L., Zhang, Y.P. The unusual adaptive expansion of pancreatic ribonuclease gene in carnivora Mol. Biol. Evol., 23 (2006),pp. 2326-2335
[19]	Zhang, J. Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys Nat. Genet., 38 (2006),pp. 819-823
[20]	Zhang, J., Dyer, K.D., Rosenberg, H.F. Evolution of the rodent eosinophil-associated RNase gene family by rapid gene sorting and positive selection Proc. Natl. Acad. Sci. U. S. A., 97 (2000),pp. 4701-4706
[21]	Zhang, J., Zhang, Y.P., Rosenberg, H.F. Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey Nat. Genet., 30 (2002),pp. 411-415
[22]	Zhou, X., Wang, B., Pan, Q. et al. Whole-genome sequencing of the snub-nosed monkey provides insights into folivory and evolutionary history Nat. Genet., 46 (2014),pp. 1303-1310