dbEMT 2.0: An updated database for epithelial-mesenchymal transition genes with experimentally verified information and precalculated regulation information for cancer metastasis

Min Zhao^{1
, ,},
Yining Liu²,
Chong Zheng³,
Hong Qu^{4
, ,}

1.
School of Science, and Engineering, University of the Sunshine Coast, Maroochydore DC, Queensland, 4558, Australia
2.
The School of Public Health, Institute for Chemical Carcinogenesis, Guangzhou Medical University, Guangzhou 510182, China
3.
Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing 100871, China
4.
Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing 100871, China

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Corresponding author: E-mail address: mzhao@usc.edu.au (Min Zhao); E-mail address: quh@mail.cbi.pku.edu.cn (Hong Qu)

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[1]	Fischer, K.R., Durrans, A., Lee, S., Sheng, J., Li, F., Wong, S.T., Choi, H., El Rayes, T., Ryu, S., Troeger, J., Schwabe, R.F., Vahdat, L.T., Altorki, N.K., Mittal, V. and Gao, D., 2015.Epithelial-to-mesenchymal transition is not required for lung metastasis but contributes to chemoresistance. Nature. 527, 472-476.
[2]	Jiang, Z.S., Sun, Y.Z., Wang, S.M. and Ruan, J.S., 2017.Epithelial-mesenchymal transition: potential regulator of ABC transporters in tumor progression. J. Cancer. 8, 2319-2327.
[3]	Liu, Y., Li, Z., Lu, J., Zhao, M. and Qu, H., 2017.CMGene: A literature-based database and knowledge resource for cancer metastasis genes. J. Genet. Genomics. 44, 277-279.
[4]	Pastushenko, I., Brisebarre, A., Sifrim, A., Fioramonti, M., Revenco, T., Boumahdi, S., Van Keymeulen, A., Brown, D., Moers, V., Lemaire, S., De Clercq, S., Minguijon, E., Balsat, C., Sokolow, Y., Dubois, C., De Cock, F., Scozzaro, S., Sopena, F., Lanas, A., D'Haene, N., Salmon, I., Marine, J.C., Voet, T., Sotiropoulou, P.A. and Blanpain, C., 2018.Identification of the tumour transition states occurring during EMT. Nature. 556, 463-468.
[5]	Plikus, M.V., Van Spyk, E.N., Pham, K., Geyfman, M., Kumar, V., Takahashi, J.S. and Andersen, B., 2015.The circadian clock in skin: implications for adult stem cells, tissue regeneration, cancer, aging, and immunity. J. Biol. Rhythms. 30, 163-182.
[6]	Ye, A.Y., Liu, Q.R., Li, C.Y., Zhao, M. and Qu, H., 2014.Human transporter database: comprehensive knowledge and discovery tools in the human transporter genes. PloS one. 9, e88883.
[7]	Zhao, M., Kong, L., Liu, Y. and Qu, H., 2015.dbEMT: an epithelial-mesenchymal transition associated gene resource. Sci. Rep. 5, 11459.
[8]	Zheng, X., Carstens, J.L., Kim, J., Scheible, M., Kaye, J., Sugimoto, H., Wu, C.C., LeBleu, V.S. and Kalluri, R., 2015.Epithelial-to-mesenchymal transition is dispensable for metastasis but induces chemoresistance in pancreatic cancer. Nature. 527, 525-530.

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doi: 10.1016/j.jgg.2019.11.010

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dbEMT 2.0: An updated database for epithelial-mesenchymal transition genes with experimentally verified information and precalculated regulation information for cancer metastasis

Corresponding author: E-mail address: mzhao@usc.edu.au (Min Zhao); E-mail address: quh@mail.cbi.pku.edu.cn (Hong Qu)

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doi: 10.1016/j.jgg.2019.11.010

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dbEMT 2.0: An updated database for epithelial-mesenchymal transition genes with experimentally verified information and precalculated regulation information for cancer metastasis

Corresponding author: E-mail address: mzhao@usc.edu.au (Min Zhao); E-mail address: quh@mail.cbi.pku.edu.cn (Hong Qu)

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